DNA Tests
Root DNA Test - In-Field Microbial Analysis
SKU: IF-01 Technology: Shotgun Metagenomics Read Depth: 10M
This test profiles the rhizophagy zone—the first 1mm of soil adhered to the crop root—using shotgun metagenomic sequencing. It reveals how crops are engineering their microbiome to influence nutrient uptake, hormone signaling, and pathogen suppression. Farmers and agronomists use this test to evaluate microbial deficiencies, identify disease risk, and benchmark root health in treated vs. untreated or affected vs. unaffected areas. Not part of the Roots to Shoots system, this standalone test is ideal for in-season diagnostics, microbial benchmarking, and guiding the next step in biological input selection.
- Targets Rhizophagy Zone for Low-Noise Microbial Profiling
- Detects Functional Traits in Nutrient & Hormone Cycling
- Screens for Soilborne Pathogens & Root Stressors
- Supports Treated vs. Untreated or Zone-Based Comparisons
- Guides Biological or Crop Management Decisions
$249 /test
- 21-day turnaround from sample receipt
Sample Collection Protocols
Sampling Overview:
Collect fine feeder roots with rhizosphere soil attached at growth stages appropriate to your crop. Do not was. Place in RhizeBio Root DNA Bag. Ship chilled.
Crop
Sampling Protocol
Corn
Soybean
Potato
Green Bean
Grasses/Cereals
Peas
Strawberry
Sugar Beets
Other / Custom Crop
Why Rhizebio Testing?
Our advanced testing methods provide actionable insights that help you make informed decisions for your agricultural practices.

Cutting-Edge Science
Advanced microbiome analysis using the latest sequencing technology.

Actionable Insights
Advanced microbiome analysis using the latest sequencing technology.

Sustainable Future
Helping you build healthier soils and more sustainable agricultural systems.
Ready to Transform Your Agricultural Practices?
Start your journey toward sustainable agriculture with Rhizebio’s advanced microbiome testing services.
Frequently Asked Questions
What makes RhizeBio™ different from other soil tests?
Unlike traditional soil testing that measures chemical nutrients, the Rhize Soil Health Test uses advanced metagenomic tools to measure soil biodiversity to predict function. Soil is one of the most complex environments on earth, with billions of microbes in each gram. The only reliable way to measure soil biodiversity is through advanced next generation sequencing platforms and metagenomic applications.
How does the microbiome relate to soil?
The microbiome represents all of the microorganisms that inhabit a particular environment. In the case of soil, the microbiome is complex and diverse and it functions to retain nutrients, cycle nutrients for plant availability, promote aggregate formation, mineralize nutrients, suppress disease and degrade organic and inorganic compounds. In short, a healthy soil microbiome increases crop yield and protects crops from disease and other stresses.
What is the importance of genomics in RhizeBio's approach to soil health?
Genomics allows us to understand the genetic makeup of the soil’s microbiome. This knowledge is crucial in assessing soil health and biodiversity. At RhizeBio, we use genomics to transform raw soil DNA sequencing data into user-friendly and informative soil health reports, empowering farmers to make informed decisions about their soil management practices.
How are microbes beneficial to soil and why is it important to measure the microbes in my soil?
The microbes in soil improve crop production in many ways. Here are just a few:
- Producing horomones that promote root growth
- Increasing water intake
- Adding nutrients to the soil through the breakdown of organic and inorganic compounds
- Improving nutrient absorption by breaking down vitamins and other compounds into bioavailable forms
- Improving soil structure
- Improving crop immunity
- Protecting crops from harmful bacteria, fungi, nematodes, and other pests
Get in Touch
Ready to transform your agricultural practices? Contact our team of experts to learn more about our advanced soil testing services.
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